8XK7: binary complex of DNA polymerase SFM4-3 recognizing C2 methyoxy nucleotide

PDB ID: 8XK7Download
MMDB ID: 255713
PDB Deposition Date: 2023/12/22
Updated in MMDB: 2024/12
Experimental Method:
x-ray diffraction
Resolution: 2  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 8XK7: trimeric; determined by author and by software (PISA)
Molecular Components in 8XK7
Label Count Molecule
Protein (1 molecule)
1
DNA Polymerase I, Thermostable
Molecule annotation
Nucleotides(2 molecules)
1
DNA(5'-d(*ap*ap*ap*cp*gp*gp*cp*gp*cp*cp*gp*tp*gp*gp*tp*cp*omg)-3')
Molecule annotation
1
DNA(5'-d(*gp*ap*cp*cp*ap*cp*gp*gp*cp*gp*cp*cp*omg)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (6 molecules)
1
2
PHOSPHATE IONPHOSPHATE ION
2
3
SULFATE IONSULFATE ION
3
1
DI(HYDROXYETHYL)ETHERDI(HYDROXYETHYL)ETHER
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303