8XHM: Crystal structure of Nocardia seriolae dUTP diphosphatase

PDB ID: 8XHMDownload
MMDB ID: 254922
PDB Deposition Date: 2023/12/18
Updated in MMDB: 2024/11
Experimental Method:
x-ray diffraction
Resolution: 2.12  Å
Source Organism:
Similar Structures:
Biological Unit for 8XHM: trimeric; determined by author and by software (PISA)
Molecular Components in 8XHM
Label Count Molecule
Proteins (3 molecules)
3
Deoxyuridine 5'-triphosphate Nucleotidohydrolase
Molecule annotation
Chemicals and Non-standard biopolymers (14 molecules)
1
3
2'-DEOXYURIDINE 5'-MONOPHOSPHATE2'-DEOXYURIDINE 5'-MONOPHOSPHATE
2
1
PHOSPHATE IONPHOSPHATE ION
3
4
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
4
6
DI(HYDROXYETHYL)ETHERDI(HYDROXYETHYL)ETHER
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303