8X8G: Crystal structure of EndoSz mutant D234M, from Streptococcus equi subsp. Zooepidemicus Sz105, in complex with oligosaccharide G2S2-oxazoline

PDB ID: 8X8GDownload
MMDB ID: 249303
PDB Deposition Date: 2023/11/27
Updated in MMDB: 2024/07
Experimental Method:
x-ray diffraction
Resolution: 2.27  Å
Source Organism:
Similar Structures:
Biological Unit for 8X8G: monomeric; determined by author and by software
Molecular Components in 8X8G
Label Count Molecule
Protein (1 molecule)
1
Glycoside Hydrolase
Molecule annotation
Chemicals and Non-standard biopolymers (11 molecules)
1
1
beta-D-mannopyranosebeta-D-mannopyranose
2
2
alpha-D-mannopyranosealpha-D-mannopyranose
3
2
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
4
2
beta-D-galactopyranosebeta-D-galactopyranose
5
2
N-acetyl-alpha-neuraminic acidN-acetyl-alpha-neuraminic acid
6
1
2-METHYL-4,5-DIHYDRO-(1,2-DIDEOXY-ALPHA-D-GLUCOPYRANOSO)[2,1-D]-1,3-OXAZOLE2-METHYL-4,5-DIHYDRO-(1,2-DIDEOXY-ALPHA-D-GLUCOPYRANOSO)[2,1-D]-1,3-OXAZOLE
7
1
CALCIUM IONCALCIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303