8X51: Structure of DNA-bound GajA dimer (focused refinement)

PDB ID: 8X51Download
MMDB ID: 243405
PDB Deposition Date: 2023/11/16
Updated in MMDB: 2024/10
Experimental Method:
electron microscopy
Resolution: 2.92  Å
Source Organism:
Bacillus cereus VD045▼
Similar Structures:
Biological Unit for 8X51: tetrameric; determined by author
Molecular Components in 8X51
Label Count Molecule
Proteins (2 molecules)
2
Endonuclease Gaja
Molecule annotation
Nucleotides(2 molecules)
1
DNA (5'-d(*tp*tp*tp*ap*ap*tp*ap*ap*cp*cp*cp*gp*gp*tp*tp*ap*tp*tp*tp*tp*t)-3')
Molecule annotation
1
DNA (5'-d(*ap*ap*ap*ap*ap*tp*ap*ap*cp*cp*gp*gp*gp*tp*tp*ap*tp*tp*ap*ap*a)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (2 molecules)
1
2
CALCIUM IONCALCIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303