8X45: Crystal structure of DIMT1 in complex with 5'-methylthioadenosine from Pyrococcus horikoshii (FormII)

PDB ID: 8X45Download
MMDB ID: 251551
PDB Deposition Date: 2023/11/15
Updated in MMDB: 2024/10
Experimental Method:
x-ray diffraction
Resolution: 2.5  Å
Source Organism:
Similar Structures:
Biological Unit for 8X45: monomeric; determined by author
Molecular Components in 8X45
Label Count Molecule
Protein (1 molecule)
1
Probable Ribosomal RNA Small Subunit Methyltransferase a
(Gene symbol: PH_RS08595)
Molecule annotation
Chemicals and Non-standard biopolymers (13 molecules)
1
1
5'-DEOXY-5'-METHYLTHIOADENOSINE5'-DEOXY-5'-METHYLTHIOADENOSINE
2
4
ZINC IONZINC ION
3
2
SULFITE IONSULFITE ION
4
1
GLYCEROLGLYCEROL
5
3
1,2-ETHANEDIOL1,2-ETHANEDIOL
6
1
DI(HYDROXYETHYL)ETHERDI(HYDROXYETHYL)ETHER
7
1
TRIETHYLENE GLYCOLTRIETHYLENE GLYCOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303