8X3W: Crystal structure of DIMT1 from the thermophilic archaeon, Pyrococcus horikoshii

PDB ID: 8X3WDownload
MMDB ID: 251548
PDB Deposition Date: 2023/11/14
Updated in MMDB: 2024/10
Experimental Method:
x-ray diffraction
Resolution: 2.01  Å
Source Organism:
Similar Structures:
Biological Unit for 8X3W: monomeric; determined by author
Molecular Components in 8X3W
Label Count Molecule
Protein (1 molecule)
1
Probable Ribosomal RNA Small Subunit Methyltransferase a
(Gene symbol: PH_RS08595)
Molecule annotation
Chemicals and Non-standard biopolymers (22 molecules)
1
6
ZINC IONZINC ION
2
6
SULFITE IONSULFITE ION
3
3
GLYCEROLGLYCEROL
4
2
DI(HYDROXYETHYL)ETHERDI(HYDROXYETHYL)ETHER
5
3
1,2-ETHANEDIOL1,2-ETHANEDIOL
6
1
ACETATE IONACETATE ION
7
1
ARGININEARGININE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303