8X35: Neryl diphosphate synthase from Solanum lycopersicum complexed with DMSAPP, IPP, and magnesium ion (form A)

PDB ID: 8X35Download
MMDB ID: 242459
PDB Deposition Date: 2023/11/12
Updated in MMDB: 2024/04
Experimental Method:
x-ray diffraction
Resolution: 1.92  Å
Source Organism:
Similar Structures:
Biological Unit for 8X35: dimeric; determined by author and by software (PISA)
Molecular Components in 8X35
Label Count Molecule
Proteins (2 molecules)
2
Neryl Diphosphate Synthase 1
(Gene symbol: NDPS1)
Molecule annotation
Chemicals and Non-standard biopolymers (8 molecules)
1
2
MAGNESIUM IONMAGNESIUM ION
2
1
3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE
3
1
DIMETHYLALLYL S-THIOLODIPHOSPHATEDIMETHYLALLYL S-THIOLODIPHOSPHATE
4
1
DI(HYDROXYETHYL)ETHERDI(HYDROXYETHYL)ETHER
5
1
1,2-ETHANEDIOL1,2-ETHANEDIOL
6
2
DIPHOSPHATEDIPHOSPHATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303