8WY5: Structure of Gabija GajA in complex with DNA

PDB ID: 8WY5Download
MMDB ID: 243404
PDB Deposition Date: 2023/10/30
Updated in MMDB: 2024/05
Experimental Method:
electron microscopy
Resolution: 3.12  Å
Source Organism:
Bacillus cereus VD045▼
Similar Structures:
Biological Unit for 8WY5: octameric; determined by author
Molecular Components in 8WY5
Label Count Molecule
Proteins (4 molecules)
4
Endonuclease Gaja
Molecule annotation
Nucleotides(4 molecules)
2
DNA (5'-d(p*tp*tp*ap*ap*tp*ap*ap*cp*cp*cp*gp*gp*tp*tp*ap*tp*tp*tp*t)-3')
Molecule annotation
2
DNA (5'-d(p*ap*ap*ap*ap*tp*ap*ap*cp*cp*gp*gp*gp*tp*tp*ap*tp*tp*ap*a)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (4 molecules)
1
4
CALCIUM IONCALCIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303