National Center for
Biotechnology Information

8WHA: Structure of DDM1-nucleosome complex in the ADP-BeFx state with DDM1 bound to SHL2 and SHL-2

PDB ID:

MMDB ID:

245585

PDB Deposition Date:

2023/9/22

Updated in MMDB:

2024/04

Experimental Method:

electron microscopy

Resolution:

4.05 Å

Source Organism:

synthetic construct▼

Taxonomy	Molecule
synthetic construct	I, J
Arabidopsis thaliana	A, B, C, D, E, F, G, H, K, L

Similar Structures:

Biological Unit for 8WHA: dodecameric; determined by author

Molecular Components in 8WHA
Label	Count	Molecule
Proteins (10 molecules)
A E	2	Histone H3.1
B F	2	Histone H4
C G	2	Histone H2a.6
D H	2	Histone H2b.6
K L	2	Atp-dependent DNA Helicase Ddm1
Nucleotides(2 molecules)
I	1	DNA (Sense Strand)
J	1	DNA (Antisense Strand)
Chemicals and Non-standard biopolymers (4 molecules)
1	2	BERYLLIUM TRIFLUORIDE ION
2	2	ADENOSINE-5'-DIPHOSPHATE

* Click molecule labels to explore molecular sequence information.

Citing MMDB