8VU3: Cryo-EM structure of cyanobacterial PSI with bound platinum nanoparticles

PDB ID: 8VU3Download
MMDB ID: 254179
PDB Deposition Date: 2024/1/28
Updated in MMDB: 2024/11
Experimental Method:
electron microscopy
Resolution: 2.27  Å
Source Organism:
Similar Structures:
Biological Unit for 8VU3: 36-meric; determined by author
Molecular Components in 8VU3
Label Count Molecule
Proteins (36 molecules)
3
Photosystem I P700 Chlorophyll a Apoprotein A1
Molecule annotation
3
Photosystem I P700 Chlorophyll a Apoprotein A2
Molecule annotation
3
Photosystem I Iron-sulfur Center
Molecule annotation
3
Photosystem I Reaction Center Subunit II
Molecule annotation
3
Photosystem I Reaction Center Subunit IV
Molecule annotation
3
Photosystem I Reaction Center Subunit III
Molecule annotation
3
Photosystem I Reaction Center Subunit Viii
Molecule annotation
3
Photosystem I Reaction Center Subunit IX
Molecule annotation
3
Photosystem I Reaction Center Subunit Psak
Molecule annotation
3
Photosystem I Reaction Center Subunit XI
Molecule annotation
3
Photosystem I Reaction Center Subunit XII
Molecule annotation
3
Phosphorylase
Molecule annotation
Chemicals and Non-standard biopolymers (381 molecules)
1
3
CHLOROPHYLL A ISOMERCHLOROPHYLL A ISOMER
2
285
CHLOROPHYLL ACHLOROPHYLL A
3
6
PHYLLOQUINONEPHYLLOQUINONE
4
9
IRON/SULFUR CLUSTERIRON/SULFUR CLUSTER
5
66
BETA-CAROTENEBETA-CAROTENE
6
6
1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
7
3
1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
8
3
CALCIUM IONCALCIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303