8VSG: SARS-CoV-2 main protease with covalent inhibitor

PDB ID: 8VSGDownload
MMDB ID: 245022
PDB Deposition Date: 2024/1/24
Updated in MMDB: 2025/05
Experimental Method:
x-ray diffraction
Resolution: 2.071  Å
Source Organism:
Similar Structures:
Biological Unit for 8VSG: dimeric; determined by author
Molecular Components in 8VSG
Label Count Molecule
Proteins (2 molecules)
2
3c-like Proteinase Nsp5
Molecule annotation
Chemicals and Non-standard biopolymers (18 molecules)
1
1
2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
2
2
2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
3
13
DIMETHYL SULFOXIDEDIMETHYL SULFOXIDE
4
2
1,2-ETHANEDIOL1,2-ETHANEDIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303