8VKL: Cryo-EM structure of SARS-CoV-2 XBB.1.5 spike protein in complex with mouse ACE2 (conformation 2)

PDB ID: 8VKLDownload
MMDB ID: 242722
PDB Deposition Date: 2024/1/9
Updated in MMDB: 2025/03
Experimental Method:
electron microscopy
Resolution: 2.91  Å
Source Organism:
Severe acute respiratory syndrome coronavirus 2▼
Similar Structures:
Biological Unit for 8VKL: pentameric; determined by author
Molecular Components in 8VKL
Label Count Molecule
Proteins (5 molecules)
3
Spike Glycoprotein
Molecule annotation
2
Angiotensin-converting Enzyme 2
Molecule annotation
Chemicals and Non-standard biopolymers (67 molecules)
1
65
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
2
beta-D-mannopyranosebeta-D-mannopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303