8VKD: Crystal structure of dehaloperoxidase A in complex with substrate 4-nitrocatechol

PDB ID: 8VKDDownload
MMDB ID: 249876
PDB Deposition Date: 2024/1/8
Updated in MMDB: 2024/12
Experimental Method:
x-ray diffraction
Resolution: 1.4  Å
Source Organism:
Similar Structures:
Biological Unit for 8VKD: monomeric; determined by author
Molecular Components in 8VKD
Label Count Molecule
Protein (1 molecule)
1
Dehaloperoxidase a
Molecule annotation
Chemicals and Non-standard biopolymers (8 molecules)
1
1
PROTOPORPHYRIN IX CONTAINING FEPROTOPORPHYRIN IX CONTAINING FE
2
2
GLYCEROLGLYCEROL
3
2
DI(HYDROXYETHYL)ETHERDI(HYDROXYETHYL)ETHER
4
1
4-NITROCATECHOL4-NITROCATECHOL
5
1
DIMETHYL SULFOXIDEDIMETHYL SULFOXIDE
6
1
SULFATE IONSULFATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303