8VDN: DNA Ligase 1 with nick dG:C

PDB ID: 8VDNDownload
MMDB ID: 247332
PDB Deposition Date: 2023/12/16
Updated in MMDB: 2024/05
Experimental Method:
x-ray diffraction
Resolution: 2.39  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 8VDN: tetrameric; determined by author and by software (PISA)
Molecular Components in 8VDN
Label Count Molecule
Protein (1 molecule)
1
DNA Ligase 1
Molecule annotation
Nucleotides(3 molecules)
1
Downstream Oligo
Molecule annotation
1
Upstream Oligo
Molecule annotation
1
Template Oligo
Molecule annotation
Chemical and Non-standard biopolymers (1 molecule)
1
1
ADENOSINE MONOPHOSPHATEADENOSINE MONOPHOSPHATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303