8V8Y: Crystal Structure of Apo UDP-N-acetylmuramoylalanine--D-glutamate ligase (MurD) from E. coli (Orthorhombic P form)

PDB ID: 8V8YDownload
MMDB ID: 239861
PDB Deposition Date: 2023/12/6
Updated in MMDB: 2023/12
Experimental Method:
x-ray diffraction
Resolution: 1.65  Å
Source Organism:
Similar Structures:
Biological Unit for 8V8Y: monomeric; determined by author
Molecular Components in 8V8Y
Label Count Molecule
Protein (1 molecule)
1
Udp-n-acetylmuramoylalanine--d-glutamate Ligase
Molecule annotation
Chemicals and Non-standard biopolymers (8 molecules)
1
1
SODIUM IONSODIUM ION
2
3
CHLORIDE IONCHLORIDE ION
3
2
MAGNESIUM IONMAGNESIUM ION
4
1
GLYCEROLGLYCEROL
5
1
(4S)-2-METHYL-2,4-PENTANEDIOL(4S)-2-METHYL-2,4-PENTANEDIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303