8V83: 60S ribosome biogenesis intermediate (Dbp10 pre-catalytic structure - Overall map)

PDB ID: 8V83Download
MMDB ID: 246209
PDB Deposition Date: 2023/12/4
Updated in MMDB: 2024/05
Experimental Method:
electron microscopy
Resolution: 2.53  Å
Source Organism:
Similar Structures:
Biological Unit for 8V83: 48-meric; determined by author
Molecular Components in 8V83
Label Count Molecule
Proteins (45 molecules)
1
60S Ribosomal Subunit Assembly/export Protein Loc1
Molecule annotation
1
Ribosomal RNA-processing Protein 14
Molecule annotation
1
Ribosome Biogenesis Protein Brx1
Molecule annotation
1
60S Ribosomal Protein L3
Molecule annotation
1
60S Ribosomal Protein L4-a
Molecule annotation
1
Atp-dependent RNA Helicase Has1
Molecule annotation
1
60S Ribosomal Protein L6-a
Molecule annotation
1
60S Ribosomal Protein L7-a
Molecule annotation
1
Large Ribosomal Subunit Protein El8a
Molecule annotation
1
Large Ribosomal Subunit Protein Ul6a
Molecule annotation
1
Ribosome Biogenesis Protein Nsa1
Molecule annotation
1
rRNA-processing Protein Ebp2
Molecule annotation
1
Proteasome-interacting Protein Cic1
Molecule annotation
1
60S Ribosomal Protein L13-a
Molecule annotation
1
60S Ribosomal Protein L14-a
Molecule annotation
1
Large Ribosomal Subunit Protein El15a
Molecule annotation
1
Large Ribosomal Subunit Protein Ul13a
Molecule annotation
1
60S Ribosomal Protein L17-a
Molecule annotation
1
60S Ribosomal Protein L18-a
Molecule annotation
1
Protein Mak16
Molecule annotation
1
Large Ribosomal Subunit Protein El20a
Molecule annotation
1
Ribosomal RNA-processing Protein 15
Molecule annotation
1
60S Ribosomal Protein L23-a
Molecule annotation
1
Ribosome Assembly Factor Mrt4
Molecule annotation
1
60S Ribosomal Protein L26-a
Molecule annotation
1
Ribosome Biogenesis Protein Ssf1
Molecule annotation
1
Large Ribosomal Subunit Protein Ul1a
Molecule annotation
1
Nucleolar Gtp-binding Protein 1
Molecule annotation
1
60S Ribosomal Protein L32
Molecule annotation
1
60S Ribosomal Protein L33-a
Molecule annotation
1
60S Ribosomal Protein L35-a
Molecule annotation
1
60S Ribosomal Protein L36-a
Molecule annotation
1
60S Ribosomal Protein L37-a
Molecule annotation
1
60S Ribosome Subunit Biogenesis Protein Nip7
Molecule annotation
1
Ribosome Biogenesis Protein Erb1
Molecule annotation
1
Pescadillo Homolog
Molecule annotation
1
Ribosome Biogenesis Protein 15
Molecule annotation
1
25S rRNA (Cytosine(2870)-c(5))-methyltransferase
Molecule annotation
1
Ribosome Biogenesis Protein Nsa2
Molecule annotation
1
Ribosome Biogenesis Protein Rlp7
Molecule annotation
1
Ribosome Biogenesis Protein Rlp24
Molecule annotation
1
Nucleolar Protein 16
Molecule annotation
1
Ribosomal RNA-processing Protein 1
Molecule annotation
1
Ribosome Production Factor 1
Molecule annotation
1
Eukaryotic Translation Initiation Factor 6
Molecule annotation
Nucleotides(3 molecules)
1
Saccharomyces Cerevisiae S288c 25S Ribosomal RNA
Molecule annotation
1
Saccharomyces Cerevisiae S288c 5.8s Ribosomal RNA
Molecule annotation
1
Saccharomyces Cerevisiae Its-2
Molecule annotation
Chemicals and Non-standard biopolymers (2 molecules)
2
* Click molecule labels to explore molecular sequence information.

Citing MMDB