8V7C: Human DNA polymerase eta-DNA-dT primer gemCTP insertion ternary complex at pH7.0 (K+ MES) with 1 Ca2+ ion

PDB ID: 8V7CDownload
MMDB ID: 247058
PDB Deposition Date: 2023/12/4
Updated in MMDB: 2025/06
Experimental Method:
x-ray diffraction
Resolution: 1.79  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 8V7C: trimeric; determined by author and by software (PISA)
Molecular Components in 8V7C
Label Count Molecule
Protein (1 molecule)
1
DNA Polymerase ETA
Molecule annotation
Nucleotides(2 molecules)
1
DNA (5'-d(*cp*ap*tp*gp*ap*tp*gp*ap*cp*gp*cp*t)-3')
Molecule annotation
1
DNA (5'-d(*ap*gp*cp*gp*tp*cp*ap*t*())-3')
Molecule annotation
Chemicals and Non-standard biopolymers (6 molecules)
1
3
GLYCEROLGLYCEROL
2
1
2'-deoxy-2',2'-difluorocytidine 5'-(tetrahydrogen triphosphate)2'-deoxy-2',2'-difluorocytidine 5'-(tetrahydrogen triphosphate)
3
1
CALCIUM IONCALCIUM ION
4
1
POTASSIUM IONPOTASSIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303