8V6H: DNA initiation complex (configuration 2) of Xenopus laevis DNA polymerase alpha-primase

PDB ID: 8V6HDownload
MMDB ID: 240320
PDB Deposition Date: 2023/12/1
Updated in MMDB: 2023/12
Experimental Method:
electron microscopy
Resolution: 11.11  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 8V6H: hexameric; determined by author
Molecular Components in 8V6H
Label Count Molecule
Proteins (4 molecules)
1
DNA Polymerase Alpha Catalytic Subunit
Molecule annotation
1
DNA Polymerase Alpha Subunit B
Molecule annotation
1
DNA Primase Large Subunit
Molecule annotation
1
DNA Primase
Molecule annotation
Nucleotides(2 molecules)
1
DNA Template
Molecule annotation
1
RNA Primer
Molecule annotation
Chemicals and Non-standard biopolymers (7 molecules)
1
3
ZINC IONZINC ION
2
1
2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE
3
2
MAGNESIUM IONMAGNESIUM ION
4
1
IRON/SULFUR CLUSTERIRON/SULFUR CLUSTER
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303