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8UU4: Cryo-EM structure of the Listeria innocua 70S ribosome in complex with HPF (structure I-A)

PDB ID:	8UU4 Download
MMDB ID:	243370
PDB Deposition Date:	2023/10/31
Updated in MMDB:	2024/05
Experimental Method:	electron microscopy
Resolution:	3 Å
Source Organism:	Listeria innocua
Similar Structures:

Biological Unit for 8UU4: 50-meric; determined by author

Molecular Components in 8UU4
Label	Count	Molecule
Proteins (47 molecules)
b	1	Small Ribosomal Subunit Protein US2
c	1	Small Ribosomal Subunit Protein US3
d	1	Small Ribosomal Subunit Protein US4
e	1	Small Ribosomal Subunit Protein US5
f	1	Small Ribosomal Subunit Protein BS6
g	1	Small Ribosomal Subunit Protein US7
h	1	Small Ribosomal Subunit Protein US8
i	1	Small Ribosomal Subunit Protein US9
j	1	Small Ribosomal Subunit Protein Us10
k	1	Small Ribosomal Subunit Protein Us11
l	1	Small Ribosomal Subunit Protein Us12
m	1	Small Ribosomal Subunit Protein Us13
n	1	Small Ribosomal Subunit Protein Us14
o	1	Small Ribosomal Subunit Protein Us15
p	1	Small Ribosomal Subunit Protein Bs16
q	1	Small Ribosomal Subunit Protein Us17
r	1	Small Ribosomal Subunit Protein Bs18
s	1	Small Ribosomal Subunit Protein Us19
t	1	Small Ribosomal Subunit Protein Bs20
w	1	Ribosome Hibernation Promoting Factor
C	1	Large Ribosomal Subunit Protein UL2
D	1	Large Ribosomal Subunit Protein UL3
E	1	Large Ribosomal Subunit Protein UL4
F	1	Large Ribosomal Subunit Protein UL5
G	1	Large Ribosomal Subunit Protein UL6
L	1	Large Ribosomal Subunit Protein Ul13
M	1	Large Ribosomal Subunit Protein Ul14
N	1	Large Ribosomal Subunit Protein Ul15
O	1	Large Ribosomal Subunit Protein Ul16
P	1	Large Ribosomal Subunit Protein Bl17
Q	1	Large Ribosomal Subunit Protein Ul18
R	1	Large Ribosomal Subunit Protein Bl19
S	1	Large Ribosomal Subunit Protein Bl20
T	1	Large Ribosomal Subunit Protein Bl21
U	1	Large Ribosomal Subunit Protein Ul22
V	1	Large Ribosomal Subunit Protein Ul23
W	1	Large Ribosomal Subunit Protein Ul24
Y	1	Large Ribosomal Subunit Protein Bl27
Z	1	Large Ribosomal Subunit Protein Bl28
1	1	Large Ribosomal Subunit Protein Ul29
2	1	Large Ribosomal Subunit Protein Ul30
3	1	Large Ribosomal Subunit Protein Bl31b
4	1	Large Ribosomal Subunit Protein Bl32
5	1	Large Ribosomal Subunit Protein Bl33
6	1	Large Ribosomal Subunit Protein Bl34
7	1	Large Ribosomal Subunit Protein Bl35
8	1	Large Ribosomal Subunit Protein Bl36
Nucleotides(3 molecules)
a	1	16S Ribosomal RNA
A	1	23S Ribosomal RNA
B	1	5S Ribosomal RNA
Chemicals and Non-standard biopolymers (453 molecules)
1	449	MAGNESIUM ION
2	4	ZINC ION

* Click molecule labels to explore molecular sequence information.

Citing MMDB

Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303