National Center for
Biotechnology Information

8UTI: Eukaryotic 80S ribosome with Reh1 and A/P site tRNA

PDB ID:	8UTI Download
MMDB ID:	254576
PDB Deposition Date:	2023/10/31
Updated in MMDB:	2024/11
Experimental Method:	electron microscopy
Resolution:	3.13 Å
Source Organism:	Saccharomyces cerevisiae
Similar Structures:

Biological Unit for 8UTI: 82-meric; determined by author

Molecular Components in 8UTI
Label	Count	Molecule
Proteins (75 molecules)
z	1	Cytoplasmic 60S Subunit Biogenesis Factor Reh1 (N-terminal 3xflag Tag)
SP	1	40S Ribosomal Protein S0-a
SQ	1	40S Ribosomal Protein S1-a
SE	1	40S Ribosomal Protein S15
SR	1	40S Ribosomal Protein S2
SA	1	40S Ribosomal Protein S3
SS	1	40S Ribosomal Protein S4-a
SB	1	40S Ribosomal Protein S5
ST	1	40S Ribosomal Protein S6-a
SU	1	40S Ribosomal Protein S7-a
SV	1	40S Ribosomal Protein S8-a
SW	1	40S Ribosomal Protein S9-a
SC	1	40S Ribosomal Protein S10-a
SX	1	40S Ribosomal Protein S11-a
SD	1	40S Ribosomal Protein S12
SY	1	40S Ribosomal Protein S13
SZ	1	40S Ribosomal Protein S14-b
SF	1	40S Ribosomal Protein S16-a
SG	1	40S Ribosomal Protein S17-b
SH	1	40S Ribosomal Protein S18-a
SI	1	40S Ribosomal Protein S19-a
SJ	1	40S Ribosomal Protein S20
Sa	1	40S Ribosomal Protein S21-a
Sb	1	40S Ribosomal Protein S22-a
Sc	1	40S Ribosomal Protein S23-a
Sd	1	40S Ribosomal Protein S24-a
Se	1	40S Ribosomal Protein S26-b
Sf	1	40S Ribosomal Protein S27-a
SM	1	40S Ribosomal Protein S29-a
Sg	1	40S Ribosomal Protein S30-a
SN	1	40S Ribosomal Protein S31
SO	1	40S Ribosomal Protein Asc1
SL	1	40S Ribosomal Protein S28-a
AA	1	40S Ribosomal Protein S25-a
LD	1	60S Ribosomal Protein L2-a
LE	1	60S Ribosomal Protein L3
LF	1	60S Ribosomal Protein L4-a
LG	1	60S Ribosomal Protein L5
LH	1	60S Ribosomal Protein L6-b
LI	1	60S Ribosomal Protein L7-a
LJ	1	60S Ribosomal Protein L8-a
LK	1	60S Ribosomal Protein L9-a
LL	1	60S Ribosomal Protein L10
LM	1	60S Ribosomal Protein L11-b
LN	1	60S Ribosomal Protein L13-a
LO	1	60S Ribosomal Protein L14-a
LP	1	60S Ribosomal Protein L15-a
LQ	1	60S Ribosomal Protein L16-a
LR	1	60S Ribosomal Protein L17-a
LS	1	60S Ribosomal Protein L18-a
LT	1	60S Ribosomal Protein L19-a
LU	1	60S Ribosomal Protein L20-a
LV	1	60S Ribosomal Protein L21-a
LW	1	60S Ribosomal Protein L22-a
LX	1	60S Ribosomal Protein L23-a
LY	1	60S Ribosomal Protein L24-a
LZ	1	60S Ribosomal Protein L25
La	1	60S Ribosomal Protein L26-a
Lb	1	60S Ribosomal Protein L27-a
Lc	1	60S Ribosomal Protein L28
Ld	1	60S Ribosomal Protein L29
Le	1	60S Ribosomal Protein L30
Lf	1	60S Ribosomal Protein L31-a
Lg	1	60S Ribosomal Protein L32
Lh	1	60S Ribosomal Protein L33-a
Li	1	60S Ribosomal Protein L34-a
Lj	1	60S Ribosomal Protein L35-a
Lk	1	60S Ribosomal Protein L36-a
Ll	1	60S Ribosomal Protein L37-a
Lm	1	60S Ribosomal Protein L38
Ln	1	60S Ribosomal Protein L39
Lo	1	60S Ribosomal Protein L40-a
Lp	1	60S Ribosomal Protein L41-a
Lq	1	60S Ribosomal Protein L42-a
Lr	1	60S Ribosomal Protein L43-a
Nucleotides(7 molecules)
A	1	25S rRNA
B	1	5S rRNA
C	1	5.8s rRNA
D	1	Messenger RNA (5'-r(papapupapapupgpapapap*a)-3')
m	1	a Site tRNA
n	1	P Site Initiator tRNA
E	1	18S rRNA
Chemical and Non-standard biopolymers (1 molecule)
1	1	4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione

* Click molecule labels to explore molecular sequence information.

Citing MMDB

Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303