8UO9: Structure of synaptic vesicle protein 2A in complex with a nanobody

PDB ID: 8UO9Download
MMDB ID: 247326
PDB Deposition Date: 2023/10/19
Updated in MMDB: 2024/12
Experimental Method:
electron microscopy
Resolution: 3.3  Å
Source Organism:
Lama glama▼
Similar Structures:
Biological Unit for 8UO9: dimeric; determined by author
Molecular Components in 8UO9
Label Count Molecule
Proteins (2 molecules)
1
Synaptic Vesicle Glycoprotein 2A
Molecule annotation
1
Nanobody
Molecule annotation
Chemicals and Non-standard biopolymers (10 molecules)
1
6
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
1
beta-D-mannopyranosebeta-D-mannopyranose
3
1
(4S)-1-{[(4S)-2-(methoxymethyl)-6-(trifluoromethyl)imidazo[2,1-b][1,3,4]thiadiazol-5-yl]methyl}-4-(4,4,4-trifluorobutyl)pyrrolidin-2-one(4S)-1-{[(4S)-2-(methoxymethyl)-6-(trifluoromethyl)imidazo[2,1-b][1,3,4]thiadiazol-5-yl]methyl}-4-(4,4,4-trifluorobutyl)pyrrolidin-2-one
4
1
CHOLESTEROL HEMISUCCINATECHOLESTEROL HEMISUCCINATE
5
1
1,2-DIDECANOYL-SN-GLYCERO-3-[PHOSPHO-L-SERINE]1,2-DIDECANOYL-SN-GLYCERO-3-[PHOSPHO-L-SERINE]
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303