8U5P: Structure of Mango II aptamer bound to T01-6A-B

PDB ID: 8U5PDownload
MMDB ID: 244706
PDB Deposition Date: 2023/9/12
Updated in MMDB: 2025/12
Experimental Method:
x-ray diffraction
Resolution: 2.9  Å
Source Organism:
Biological Unit for 8U5P: monomeric; determined by author
Molecular Components in 8U5P
Label Count Molecule
Nucleotide(1 molecule)
1
Mango II
Molecule annotation
Chemicals and Non-standard biopolymers (4 molecules)
1
3
POTASSIUM IONPOTASSIUM ION
2
1
3-[2,16-dioxo-20-(2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl)-6,9,12-trioxa-3,15-diazaicosan-1-yl]-2-{(E)-[6-(4-methoxyphenyl)-1-methylquinolin-4(1H)-ylidene]methyl}-1,3-benzothiazol-3-ium3-[2,16-dioxo-20-(2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl)-6,9,12-trioxa-3,15-diazaicosan-1-yl]-2-{(E)-[6-(4-methoxyphenyl)-1-methylquinolin-4(1H)-ylidene]methyl}-1,3-benzothiazol-3-ium
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303