8U0J: DdmE in complex with guide and target DNA

PDB ID: 8U0JDownload
MMDB ID: 249256
PDB Deposition Date: 2023/8/29
Updated in MMDB: 2024/07
Experimental Method:
electron microscopy
Resolution: 3.1  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 8U0J: tetrameric; determined by author
Molecular Components in 8U0J
Label Count Molecule
Protein (1 molecule)
1
Ddme
Molecule annotation
Nucleotides(3 molecules)
1
DNA (5'-d(p*gp*tp*tp*ap*gp*ap*cp*tp*tp*tp*ap*ap*gp*t)-3')
Molecule annotation
1
DNA (5'-d(p*ap*cp*tp*tp*ap*ap*ap*gp*tp*cp*tp*ap*ap*cp*cp*tp*ap*tp*ap*gp*gp*ap*t)-3')
Molecule annotation
1
DNA (5'-d(p*ap*tp*cp*cp*tp*ap*tp*ap*gp*gp*a)-3')
Molecule annotation
Chemical and Non-standard biopolymers (1 molecule)
1
1
MAGNESIUM IONMAGNESIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303