8TNR: Cryo-EM structure of DDB1dB:CRBN:PT-179:SD40, conformation 2

PDB ID: 8TNRDownload
MMDB ID: 244075
PDB Deposition Date: 2023/8/2
Updated in MMDB: 2024/04
Experimental Method:
electron microscopy
Resolution: 2.5  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 8TNR: trimeric; determined by author
Molecular Components in 8TNR
Label Count Molecule
Proteins (3 molecules)
1
DNA Damage-binding Protein 1
Molecule annotation
1
Protein Cereblon
Molecule annotation
1
Maltose/maltodextrin-binding Periplasmic Protein,sd40
Molecule annotation
Chemicals and Non-standard biopolymers (3 molecules)
1
2
ZINC IONZINC ION
2
1
2-[(3S)-2,6-dioxopiperidin-3-yl]-5-(morpholin-4-yl)-1H-isoindole-1,3(2H)-dione2-[(3S)-2,6-dioxopiperidin-3-yl]-5-(morpholin-4-yl)-1H-isoindole-1,3(2H)-dione
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303