8TJC: Structure of human beta 1,3-N-acetylglucosaminyltransferase 2 with compound 8a

PDB ID: 8TJCDownload
MMDB ID: 239511
PDB Deposition Date: 2023/7/20
Updated in MMDB: 2023/12
Experimental Method:
x-ray diffraction
Resolution: 2.2  Å
Source Organism:
Similar Structures:
Biological Unit for 8TJC: tetrameric; determined by author
Molecular Components in 8TJC
Label Count Molecule
Proteins (4 molecules)
4
N-acetyllactosaminide Beta-1,3-n-acetylglucosaminyltransferase 2
(Gene symbol: B3GNT2)
Molecule annotation
Chemicals and Non-standard biopolymers (31 molecules)
1
12
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
4
beta-D-mannopyranosebeta-D-mannopyranose
3
4
alpha-D-mannopyranosealpha-D-mannopyranose
4
4
MANGANESE (II) IONMANGANESE (II) ION
5
4
(6M)-1-[(2R)-3,3-dimethylbutan-2-yl]-6-[(5S)-5-methyl-4-oxo-5-phenyl-4,5-dihydro-1H-imidazol-2-yl]-1,3-dihydro-2H-benzimidazol-2-one(6M)-1-[(2R)-3,3-dimethylbutan-2-yl]-6-[(5S)-5-methyl-4-oxo-5-phenyl-4,5-dihydro-1H-imidazol-2-yl]-1,3-dihydro-2H-benzimidazol-2-one
6
3
DI(HYDROXYETHYL)ETHERDI(HYDROXYETHYL)ETHER
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303