8TFD: Crystal structure of a stem-loop DNA aptamer complexed with SARS-CoV-2 nucleocapsid protein RNA-binding domain

PDB ID: 8TFDDownload
MMDB ID: 254885
PDB Deposition Date: 2023/7/10
Updated in MMDB: 2024/12
Experimental Method:
x-ray diffraction
Resolution: 1.55  Å
Source Organism:
Severe acute respiratory syndrome coronavirus 2▼
Similar Structures:
Biological Unit for 8TFD: dimeric; determined by author and by software (PISA)
Molecular Components in 8TFD
Label Count Molecule
Protein (1 molecule)
1
Nucleoprotein
Molecule annotation
Nucleotide(1 molecule)
1
DNA Aptamer
Molecule annotation
Chemicals and Non-standard biopolymers (6 molecules)
1
6
1,2-ETHANEDIOL1,2-ETHANEDIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303