8T3M: TRPV1 in nanodisc bound with 3 LPA molecules

PDB ID: 8T3MDownload
MMDB ID: 246516
PDB Deposition Date: 2023/6/7
Updated in MMDB: 2024/10
Experimental Method:
electron microscopy
Resolution: 3.5  Å
Source Organism:
Similar Structures:
Biological Unit for 8T3M: tetrameric; determined by author
Molecular Components in 8T3M
Label Count Molecule
Proteins (4 molecules)
4
Transient Receptor Potential Cation Channel Subfamily V Member 1
(Gene symbol: Trpv1)
Molecule annotation
Chemicals and Non-standard biopolymers (6 molecules)
1
1
[(2~{R})-2-hexadecanoyloxy-3-[oxidanyl-[(2~{S},3~{S},5~{R},6~{S})-2,3,4,5,6-pentakis(oxidanyl)cyclohexyl]oxy-phosphoryl]oxy-propyl] hexadecanoate[(2~{R})-2-hexadecanoyloxy-3-[oxidanyl-[(2~{S},3~{S},5~{R},6~{S})-2,3,4,5,6-pentakis(oxidanyl)cyclohexyl]oxy-phosphoryl]oxy-propyl] hexadecanoate
2
2
SODIUM IONSODIUM ION
3
3
(2R)-2-hydroxy-3-(phosphonooxy)propyl tetradecanoate(2R)-2-hydroxy-3-(phosphonooxy)propyl tetradecanoate
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303