8SZ5: [2T5] Self-assembling DNA motif with 5 base pairs between junctions and P32 symmetry

PDB ID: 8SZ5Download
MMDB ID: 246510
PDB Deposition Date: 2023/5/26
Updated in MMDB: 2024/05
Experimental Method:
x-ray diffraction
Resolution: 2.89  Å
Source Organism:
Biological Unit for 8SZ5: dodecameric; determined by author
Molecular Components in 8SZ5
Label Count Molecule
Nucleotides(12 molecules)
3
DNA (5'-d(*gp*ap*gp*cp*ap*gp*ap*cp*cp*tp*g)-3')
Molecule annotation
3
DNA (5'-d(p*ap*cp*gp*ap*cp*ap*cp*tp*cp*a)-3')
Molecule annotation
3
DNA (5'-d(p*cp*ap*cp*gp*t)-3')
Molecule annotation
3
DNA (5'-d(p*cp*tp*gp*ap*gp*tp*gp*tp*gp*gp*tp*cp*tp*gp*cp*t)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (6 molecules)
1
6
MAGNESIUM IONMAGNESIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303