8SWB: RNase H complex with streopure ASO and RNA

PDB ID: 8SWBDownload
MMDB ID: 247299
PDB Deposition Date: 2023/5/18
Updated in MMDB: 2024/12
Experimental Method:
x-ray diffraction
Resolution: 2  Å
Source Organism:
Similar Structures:
Biological Unit for 8SWB: trimeric; determined by author and by software (PISA)
Molecular Components in 8SWB
Label Count Molecule
Protein (1 molecule)
1
Ribonuclease H1
(Gene symbol: RNASEH1)
Molecule annotation
Nucleotide(1 molecule)
1
RNA (5'-r(*up*gp*gp*cp*gp*ap*gp*up*gp*gp*gp*up*gp*ap*gp*up*gp*ap*gp*g)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (4 molecules)
D
1
DNA (5'-R(*(OMC)P*(N7X)P*(T39)P*(C5L)P*(A2M))-D(P*(SC)P*(PST)P*(SC)P*AP*(SC)P*(SC)P*(RC)P*(AS)P*(SC)P*(PST))-R(P*(6OO)P*(RFJ)P*(6OO)P*(6OO)P*(6NW))-3')
1
1
GLYCEROLGLYCEROL
2
1
PHOSPHATE IONPHOSPHATE ION
3
1
DI(HYDROXYETHYL)ETHERDI(HYDROXYETHYL)ETHER
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303