8SPH: Crystal structure of chimeric omicron RBD (strain XBB.1) complexed with human ACE2

PDB ID: 8SPHDownload
MMDB ID: 233675
PDB Deposition Date: 2023/5/3
Updated in MMDB: 2024/10
Experimental Method:
x-ray diffraction
Resolution: 2.71  Å
Source Organism:
Severe acute respiratory syndrome coronavirus 2▼
Similar Structures:
Biological Unit for 8SPH: dimeric; determined by author
Molecular Components in 8SPH
Label Count Molecule
Proteins (2 molecules)
1
Angiotensin-converting Enzyme 2
Molecule annotation
1
Spike Protein S1
Molecule annotation
Chemicals and Non-standard biopolymers (13 molecules)
1
9
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
1
beta-D-mannopyranosebeta-D-mannopyranose
3
1
ZINC IONZINC ION
4
1
CHLORIDE IONCHLORIDE ION
5
1
1,2-ETHANEDIOL1,2-ETHANEDIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303