8SH8: Crystal structure of SARS-CoV-2 NSP3 macrodomain Asn40Asp mutant in complex with ADP-ribose (P43 crystal form)

PDB ID: 8SH8Download
MMDB ID: 246142
PDB Deposition Date: 2023/4/13
Updated in MMDB: 2024/05
Experimental Method:
x-ray diffraction
Resolution: 0.9  Å
Source Organism:
Similar Structures:
Biological Unit for 8SH8: monomeric; determined by author and by software (PISA)
Molecular Components in 8SH8
Label Count Molecule
Protein (1 molecule)
1
Papain-like Protease Nsp3
Molecule annotation
Chemical and Non-standard biopolymers (1 molecule)
1
1
[(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE[(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303