8SGB: Crystal Structure of CD1d-lipid complexed with Beta-2-Microglobulin, TCR Alpha-Chain and TCR Beta-Chain

PDB ID: 8SGBDownload
MMDB ID: 245857
PDB Deposition Date: 2023/4/12
Updated in MMDB: 2024/04
Experimental Method:
x-ray diffraction
Resolution: 2.80002  Å
Source Organism:
Similar Structures:
Biological Unit for 8SGB: tetrameric; determined by author
Molecular Components in 8SGB
Label Count Molecule
Proteins (4 molecules)
1
Antigen-presenting Glycoprotein Cd1d
(Gene symbol: CD1D)
Molecule annotation
1
Beta-2-microglobulin
(Gene symbol: B2M)
Molecule annotation
1
Natural Killer T Cell Receptor Trav26a-2 Alpha Chain
Molecule annotation
1
Natural Killer T Cell Receptor Trbv19 Beta Chain
Molecule annotation
Chemicals and Non-standard biopolymers (7 molecules)
1
4
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
1
beta-D-mannopyranosebeta-D-mannopyranose
3
1
sphingomyelinsphingomyelin
4
1
SODIUM IONSODIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303