8SDF: Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody CC25.4

PDB ID: 8SDFDownload
MMDB ID: 244035
PDB Deposition Date: 2023/4/6
Updated in MMDB: 2024/12
Experimental Method:
x-ray diffraction
Resolution: 1.79  Å
Source Organism:
Severe acute respiratory syndrome coronavirus 2▼
Similar Structures:
Biological Unit for 8SDF: trimeric; determined by author
Molecular Components in 8SDF
Label Count Molecule
Proteins (3 molecules)
1
Spike Protein S1
Molecule annotation
1
Neutralizing Antibody Cc25.4 Heavy Chain
Molecule annotation
1
Neutralizing Antibody Cc25.4 Light Chain
Molecule annotation
Chemicals and Non-standard biopolymers (7 molecules)
1
1
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
1
alpha-L-fucopyranosealpha-L-fucopyranose
3
5
(4S)-2-METHYL-2,4-PENTANEDIOL(4S)-2-METHYL-2,4-PENTANEDIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303