8S9G: SARS-CoV-2 BN.1 spike RBD bound to the human ACE2 ectodomain and the S309 neutralizing antibody Fab fragment

PDB ID: 8S9GDownload
MMDB ID: 236467
PDB Deposition Date: 2023/3/28
Updated in MMDB: 2023/10
Experimental Method:
electron microscopy
Resolution: 3  Å
Source Organism:
Severe acute respiratory syndrome coronavirus▼
Similar Structures:
Biological Unit for 8S9G: tetrameric; determined by author
Molecular Components in 8S9G
Label Count Molecule
Proteins (4 molecules)
1
Processed Angiotensin-converting Enzyme 2
Molecule annotation
1
Spike Glycoprotein
Molecule annotation
1
S309 FAB Heavy Chain
Molecule annotation
1
S309 FAB Light Chain
Molecule annotation
Chemicals and Non-standard biopolymers (10 molecules)
1
7
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
1
beta-D-mannopyranosebeta-D-mannopyranose
3
1
alpha-D-mannopyranosealpha-D-mannopyranose
4
1
alpha-L-fucopyranosealpha-L-fucopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303