8S6M: SARS-CoV-2 BQ.1.1 RBD bound to the S2V29 and the S2H97 Fab fragments

PDB ID: 8S6MDownload
MMDB ID: 253897
PDB Deposition Date: 2024/2/28
Updated in MMDB: 2024/12
Experimental Method:
x-ray diffraction
Resolution: 1.67  Å
Source Organism:
Severe acute respiratory syndrome coronavirus 2▼
Similar Structures:
Biological Unit for 8S6M: pentameric; determined by author
Molecular Components in 8S6M
Label Count Molecule
Proteins (5 molecules)
1
S2v29 FAB Heavy Chain
Molecule annotation
1
Spike Protein S1
Molecule annotation
1
S2h97 FAB Heavy Chain
Molecule annotation
1
S2v29 FAB Light Chain
Molecule annotation
1
S2h97 FAB Light Chain
Molecule annotation
Chemicals and Non-standard biopolymers (12 molecules)
1
9
1,2-ETHANEDIOL1,2-ETHANEDIOL
2
1
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
3
1
NICKEL (II) IONNICKEL (II) ION
4
1
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303