8RYV: MSOX movie series dataset 10 (11.5 MGy) for nitrite bound BrJNiR (Cu containing nitrite reductase (NirK) from Bradyrhizobium japonicum USDA110 at pH 8

PDB ID: 8RYVDownload
MMDB ID: 250156
PDB Deposition Date: 2024/2/9
Updated in MMDB: 2024/08
Experimental Method:
x-ray diffraction
Resolution: 1.45  Å
Source Organism:
Similar Structures:
Biological Unit for 8RYV: trimeric; determined by author and by software (PISA)
Molecular Components in 8RYV
Label Count Molecule
Proteins (3 molecules)
3
Copper-containing Nitrite Reductase
Molecule annotation
Chemicals and Non-standard biopolymers (30 molecules)
1
3
alpha-D-glucopyranosealpha-D-glucopyranose
2
3
beta-D-fructofuranosebeta-D-fructofuranose
3
6
COPPER (II) IONCOPPER (II) ION
4
3
NITRIC OXIDENITRIC OXIDE
5
3
NITRITE IONNITRITE ION
6
12
SULFATE IONSULFATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303