8RYI: Metformin hydrolase from Aminobacter niigataensis MD1 with urea in the active site

PDB ID: 8RYIDownload
MMDB ID: 251444
PDB Deposition Date: 2024/2/8
Updated in MMDB: 2024/10
Experimental Method:
x-ray diffraction
Resolution: 2.06  Å
Source Organism:
Similar Structures:
Biological Unit for 8RYI: hexameric; determined by author
Molecular Components in 8RYI
Label Count Molecule
Proteins (6 molecules)
4
Arginase Family Protein
Molecule annotation
2
Agmatinase Family Protein
Molecule annotation
Chemicals and Non-standard biopolymers (9 molecules)
1
2
dicarbonimidic diamidedicarbonimidic diamide
2
2
UREAUREA
3
4
NICKEL (II) IONNICKEL (II) ION
4
1
CALCIUM IONCALCIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303