8RPX: NhoI restriction endonuclease in complex with quadruply methylated DNA target

PDB ID: 8RPXDownload
MMDB ID: 249834
PDB Deposition Date: 2024/1/17
Updated in MMDB: 2024/09
Experimental Method:
x-ray diffraction
Resolution: 1.81  Å
Source Organism:
Nitrolancea hollandica▼
Similar Structures:
Biological Unit for 8RPX: tetrameric; determined by author
Molecular Components in 8RPX
Label Count Molecule
Proteins (2 molecules)
2
Restriction Endonuclease (Nhoi)
Molecule annotation
Nucleotides(2 molecules)
1
DNA (5'-d(*cp*tp*gp*(5cm)p*ap*gp*(5cm)p*tp*c)-3')
Molecule annotation
1
DNA(5'-d(*gp*ap*gp*(5cm)p*tp*gp*(5cm)p*ap*gp)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (5 molecules)
1
3
1,2-ETHANEDIOL1,2-ETHANEDIOL
2
2
CALCIUM IONCALCIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303