8REF: Crystal structure of HLA B*13:01 in complex with SVLNDILARL, an 10-mer epitope from SARS-CoV-2 Spike (S975-984)

PDB ID: 8REFDownload
MMDB ID: 246994
PDB Deposition Date: 2023/12/11
Updated in MMDB: 2024/05
Experimental Method:
x-ray diffraction
Resolution: 1.9  Å
Source Organism:
Severe acute respiratory syndrome coronavirus 2▼
Similar Structures:
Biological Unit for 8REF: trimeric; determined by author and by software (PISA)
Molecular Components in 8REF
Label Count Molecule
Proteins (3 molecules)
1
HLA Class I Histocompatibility Antigen B Alpha Chain
Molecule annotation
1
Beta-2-microglobulin
Molecule annotation
1
Spike Protein S2'
Molecule annotation
Chemicals and Non-standard biopolymers (9 molecules)
1
3
DI(HYDROXYETHYL)ETHERDI(HYDROXYETHYL)ETHER
2
4
1,2-ETHANEDIOL1,2-ETHANEDIOL
3
2
SODIUM IONSODIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303