8RDU: Conformational Landscape of the Type V-K CRISPR-associated TransposonIntegration Assembly CAST V-K composite map

PDB ID: 8RDUDownload
MMDB ID: 248497
PDB Deposition Date: 2023/12/8
Updated in MMDB: 2024/07
Experimental Method:
electron microscopy
Resolution: 2.3  Å
Source Organism:
Similar Structures:
Biological Unit for 8RDU: 32-meric; determined by author and by software
Molecular Components in 8RDU
Label Count Molecule
Proteins (25 molecules)
1
Shcas12k
Molecule annotation
1
Small Ribosomal Subunit Protein Us15
Molecule annotation
1
Tniq
Molecule annotation
14
Shtnsc
Molecule annotation
8
Tnsb
Molecule annotation
Nucleotides(7 molecules)
1
Sgrna
Molecule annotation
1
Non-target Strand - LE
Molecule annotation
1
Target Strand -LE
Molecule annotation
1
LE
Molecule annotation
1
RE
Molecule annotation
1
Non-target Strand - RE
Molecule annotation
1
Target Strand
Molecule annotation
Chemicals and Non-standard biopolymers (33 molecules)
1
17
MAGNESIUM IONMAGNESIUM ION
2
2
ZINC IONZINC ION
3
14
ADENOSINE-5'-TRIPHOSPHATEADENOSINE-5'-TRIPHOSPHATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303