8RBM: Cryo-EM structure of the NADH:ferredoxin oxidoreductase RNF from Azotobacter vinelandii, ferricyanide oxidized

PDB ID: 8RBMDownload
MMDB ID: 248901
PDB Deposition Date: 2023/12/4
Updated in MMDB: 2024/08
Experimental Method:
electron microscopy
Resolution: 3.24  Å
Source Organism:
Similar Structures:
Biological Unit for 8RBM: heptameric; determined by author and by software
Molecular Components in 8RBM
Label Count Molecule
Proteins (7 molecules)
1
Ion-translocating Oxidoreductase Complex Subunit a
Molecule annotation
1
Ion-translocating Oxidoreductase Complex Subunit C
Molecule annotation
1
Ion-translocating Oxidoreductase Complex Subunit D
Molecule annotation
1
Ion-translocating Oxidoreductase Complex Subunit E
Molecule annotation
1
Ion-translocating Oxidoreductase Complex Subunit G
Molecule annotation
2
Ion-translocating Oxidoreductase Complex Subunit B
Molecule annotation
Chemicals and Non-standard biopolymers (20 molecules)
1
1
FE2/S2 (INORGANIC) CLUSTERFE2/S2 (INORGANIC) CLUSTER
2
12
DODECYL-BETA-D-MALTOSIDEDODECYL-BETA-D-MALTOSIDE
3
3
FLAVIN MONONUCLEOTIDEFLAVIN MONONUCLEOTIDE
4
2
IRON/SULFUR CLUSTERIRON/SULFUR CLUSTER
5
1
RIBOFLAVINRIBOFLAVIN
6
1
PHOSPHATIDYLETHANOLAMINEPHOSPHATIDYLETHANOLAMINE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303