8R6Y: Structure of the SFTSV L protein stalled in a transcription-specific early elongation state with bound capped RNA [TRANSCRIPTION-EARLY-ELONGATION]

PDB ID: 8R6YDownload
MMDB ID: 245833
PDB Deposition Date: 2023
Updated in MMDB: 2024/06
Experimental Method:
electron microscopy
Resolution: 3.4  Å
Source Organism:
Similar Structures:
Biological Unit for 8R6Y: pentameric; determined by author
Molecular Components in 8R6Y
Label Count Molecule
Protein (1 molecule)
1
RNA-directed RNA Polymerase L
Molecule annotation
Nucleotides(4 molecules)
1
RNA (5'-r(*ap*cp*ap*cp*ap*gp*ap*gp*ap*cp*gp*cp*cp*cp*ap*g)-3')
Molecule annotation
1
RNA (5'-r(p*cp*up*gp*gp*gp*cp*gp*gp*up*ap*ap*ap*up*gp*u)-3')
Molecule annotation
1
RNA (5'-r(p*ap*cp*a)-3')
Molecule annotation
1
RNA (5'-r(*(m7g)*ap*ap*a)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (2 molecules)
1
1
5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine
2
1
MAGNESIUM IONMAGNESIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303