8QTN: Cryo-EM structure of the apo yeast Ceramide Synthase

PDB ID: 8QTNDownload
MMDB ID: 253882
PDB Deposition Date: 2023/10/12
Updated in MMDB: 2024/10
Experimental Method:
electron microscopy
Resolution: 3  Å
Source Organism:
Similar Structures:
Biological Unit for 8QTN: tetrameric; determined by author and by software
Molecular Components in 8QTN
Label Count Molecule
Proteins (4 molecules)
1
Ceramide Synthase Lag1
(Gene symbol: LAG1)
Molecule annotation
1
Ceramide Synthase Lac1
(Gene symbol: LAC1)
Molecule annotation
2
Ceramide Synthase Subunit Lip1
(Gene symbol: LIP1)
Molecule annotation
Chemicals and Non-standard biopolymers (10 molecules)
1
4
1,2-Distearoyl-sn-glycerophosphoethanolamine1,2-Distearoyl-sn-glycerophosphoethanolamine
2
2
hexacosanoic acidhexacosanoic acid
3
2
[(2S)-1-hexadecanoyloxy-3-[hydroxy-[(2S,3R,5S,6R)-2,3,4,5,6-pentahydroxycyclohexyl]oxy-phosphoryl]oxy-propan-2-yl] heptadecanoate[(2S)-1-hexadecanoyloxy-3-[hydroxy-[(2S,3R,5S,6R)-2,3,4,5,6-pentahydroxycyclohexyl]oxy-phosphoryl]oxy-propan-2-yl] heptadecanoate
4
2
AMMONIUM IONAMMONIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303