8QLP: CryoEM structure of the RNA/DNA bound SPARTA (BabAgo/TIR-APAZ) tetrameric complex

PDB ID: 8QLPDownload
MMDB ID: 242057
PDB Deposition Date: 2023/9/20
Updated in MMDB: 2025/07
Experimental Method:
electron microscopy
Resolution: 3.14  Å
Source Organism:
Similar Structures:
Biological Unit for 8QLP: hexadecameric; determined by author and by software
Molecular Components in 8QLP
Label Count Molecule
Proteins (8 molecules)
4
Toll/interleukin-1 Receptor Domain-containing Protein
Molecule annotation
4
Short Prokaryotic Argonaute
Molecule annotation
Nucleotides(8 molecules)
4
RNA (5'-r(*ap*up*gp*ap*cp*gp*gp*cp*up*cp*up*ap*ap*up*cp*up*ap*up*up*ap*gp*u)-3')
Molecule annotation
4
DNA (5'-d(*ap*cp*tp*ap*ap*tp*ap*gp*ap*tp*tp*ap*gp*ap*gp*cp*cp*gp*tp*c)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (4 molecules)
1
4
MAGNESIUM IONMAGNESIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303