8PNO: The MgF3(H2O) transition state analog complex of E. coli YihX

PDB ID: 8PNODownload
MMDB ID: 249554
PDB Deposition Date: 2023/6/30
Updated in MMDB: 2025/12
Experimental Method:
x-ray diffraction
Resolution: 2.2  Å
Source Organism:
Similar Structures:
Biological Unit for 8PNO: dimeric; determined by author and by software (PISA)
Molecular Components in 8PNO
Label Count Molecule
Proteins (2 molecules)
2
Alpha-d-glucose 1-phosphate Phosphatase Yihx
Molecule annotation
Chemicals and Non-standard biopolymers (15 molecules)
1
2
DI(HYDROXYETHYL)ETHERDI(HYDROXYETHYL)ETHER
2
2
trifluoromagnesate monohydratetrifluoromagnesate monohydrate
3
1
TETRAETHYLENE GLYCOLTETRAETHYLENE GLYCOL
4
1
IMIDAZOLEIMIDAZOLE
5
2
1,2-ETHANEDIOL1,2-ETHANEDIOL
6
2
MAGNESIUM IONMAGNESIUM ION
7
3
GLYCEROLGLYCEROL
8
2
CALCIUM IONCALCIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303