8PKO: The ERAD misfolded glycoprotein checkpoint complex from Chaetomium thermophilum (EDEM:PDI heterodimer)

PDB ID: 8PKODownload
MMDB ID: 249530
PDB Deposition Date: 2023/6/27
Updated in MMDB: 2025/09
Experimental Method:
electron microscopy
Resolution: 2.6  Å
Source Organism:
Similar Structures:
Biological Unit for 8PKO: dimeric; determined by author and by software
Molecular Components in 8PKO
Label Count Molecule
Proteins (2 molecules)
1
Green Fluorescent Protein,alpha-1,2-mannosidase
Molecule annotation
1
Protein Disulfide-isomerase
Molecule annotation
Chemicals and Non-standard biopolymers (17 molecules)
1
8
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
2
beta-D-mannopyranosebeta-D-mannopyranose
3
5
alpha-D-mannopyranosealpha-D-mannopyranose
4
1
CALCIUM IONCALCIUM ION
5
1
THIOSULFATETHIOSULFATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303