8PDE: Crystal Structure of the MADS-box/MEF2 Domain of MEF2D bound to dsDNA and HDAC4 deacetylase binding motif

PDB ID: 8PDEDownload
MMDB ID: 245437
PDB Deposition Date: 2023/6/12
Updated in MMDB: 2024/04
Experimental Method:
x-ray diffraction
Resolution: 2.4  Å
Source Organism:
Similar Structures:
Molecular Components in 8PDE
Label Count Molecule
Proteins (6 molecules)
4
Mef2d Protein
(Gene symbol: MEF2D)
Molecule annotation
2
Hdac4 (Histone Deacetylase 4) Binding Motif Peptide:gsgevkmklqefvlnkk
Molecule annotation
Nucleotides(4 molecules)
2
DNA (5'-d(p*ap*ap*cp*tp*ap*tp*tp*tp*ap*tp*ap*ap*gp*a)-3')
Molecule annotation
2
DNA (5'-d(p*tp*cp*tp*tp*ap*tp*ap*ap*ap*tp*ap*gp*tp*t)-3')
Molecule annotation
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303