8OYB: Time-resolved SFX structure of the class II photolyase complexed with a thymine dimer (30 microsecond pump-probe delay)

PDB ID: 8OYBDownload
MMDB ID: 238804
PDB Deposition Date: 2023/5/3
Updated in MMDB: 2023/12
Experimental Method:
x-ray diffraction
Resolution: 2.25  Å
Source Organism:
Methanosarcina mazei Go1▼
Similar Structures:
Biological Unit for 8OYB: trimeric; determined by author and by software (PISA)
Molecular Components in 8OYB
Label Count Molecule
Protein (1 molecule)
1
Deoxyribodipyrimidine Photo-lyase
Molecule annotation
Nucleotides(2 molecules)
1
Cpd-comprising Oligonucleotide
Molecule annotation
1
Counterstrand-oligonucleotide
Molecule annotation
Chemicals and Non-standard biopolymers (2 molecules)
1
1
SULFATE IONSULFATE ION
2
1
DIHYDROFLAVINE-ADENINE DINUCLEOTIDEDIHYDROFLAVINE-ADENINE DINUCLEOTIDE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303