8OWW: B5-5 nanobody bound to SARS-CoV-2 spike RBD (Wuhan)

PDB ID: 8OWWDownload
MMDB ID: 246436
PDB Deposition Date: 2023/4/28
Updated in MMDB: 2024/06
Experimental Method:
x-ray diffraction
Resolution: 1.969  Å
Source Organism:
Severe acute respiratory syndrome coronavirus 2▼
Similar Structures:
Biological Unit for 8OWW: dimeric; determined by author and by software (PISA)
Molecular Components in 8OWW
Label Count Molecule
Proteins (2 molecules)
1
Spike Protein S2'
Molecule annotation
1
B5-5 Nanobody
Molecule annotation
Chemicals and Non-standard biopolymers (8 molecules)
1
1
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
4
1,2-ETHANEDIOL1,2-ETHANEDIOL
3
2
GLYCEROLGLYCEROL
4
1
NITRATE IONNITRATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303