8ONM: Crystal structure of D-amino acid aminotransferase from Aminobacterium colombiense point mutant E113A complexed with D-glutamate

PDB ID: 8ONMDownload
MMDB ID: 245192
PDB Deposition Date: 2023/4/3
Updated in MMDB: 2024/04
Experimental Method:
x-ray diffraction
Resolution: 1.85  Å
Source Organism:
Similar Structures:
Biological Unit for 8ONM: dimeric; determined by author
Molecular Components in 8ONM
Label Count Molecule
Proteins (2 molecules)
2
Aminotransferase Class IV
Molecule annotation
Chemicals and Non-standard biopolymers (11 molecules)
1
4
1,2-ETHANEDIOL1,2-ETHANEDIOL
2
4
NITRATE IONNITRATE ION
3
2
4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE
4
1
(~{Z})-2-[[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylamino]pent-2-enedioic acid(~{Z})-2-[[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylamino]pent-2-enedioic acid
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303